CDS

Accession Number TCMCG015C00817
gbkey CDS
Protein Id XP_027102895.1
Location join(34730990..34731058,34731215..34731337,34732593..34732750,34733300..34733344,34734353..34734431,34734531..34734604,34735065..34735171,34737642..34737758,34737761..34737823,34739410..34739589,34739592..34739612,34739711..34739842,34739845..34739923,34740015..34740089,34740223..34740566,34741012..34741198,34741609..34741861,34741937..34742273,34742532..34742667,34742669..34742710,34742821..34742961,34743062..34743323,34743419..34743874,34744269..34744732,34745399..34745523,34745631..34745812,34745889..34745952,34745955..34746247,34746357..34746482,34747865..34747930,34748020..34748677,34748680..34749814,34749917..34750095,34750098..34750142,34750145..34750224)
Gene LOC113724164
GeneID 113724164
Organism Coffea arabica

Protein

Length 2306aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA506972
db_source XM_027247094.1
Definition LOW QUALITY PROTEIN: small subunit processome component 20 homolog [Coffea arabica]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCGACGCCCGCGGACGCTCGAGCCGTAAAGTCTCTAAACACAGGCGAGGGAAGCAAGAAATTTGTTTACAAGTCCAATGTTCAACAAATTGCAGAGATTGATATTAATGTATACCGAAGTTTGGACCCTGTTAAATCTGAGCCTTTTGAAGGGTCCACGTTTTTTCGCGATTGCCTAGTTGAATGGAGAGAATTAAATACTGCTGAGGATTTTATTTCATTTTATCAAGAAATGTTCCCCTTGGTACAAACCCTACCACAAATTATATTGCAAAAGGAATTGATCGTTTCAAAACTGCTTTCTAGATTACAAATAAAAAGCAGGCTATCACTGGAGCCAATACTCAGGTTGGTAGCCACATTATCAAGGGATCTTCTGGAGGATTTTTTGCCCTTTCTCCAGAGGATTGTGAATGCTATAGTATTTCTTCTGAAAAATGGTGGTGATAAGGATCCAGACATAATTAAGCAGATTTTTACGTCATGGTCATACATTATGATGTTCCTGCAGAAATATCTGATAAAGGATGTCATTCATGTGCTAAAAGTAACAGTGAAACTGAGATACTATCCACATGGTAGCATACAAAAATTTGTGGCGGAGTCCGTCTCTTTCTTACTCAGGAATGCACCTGTTGAGCAGCTTATAAAAGGTGTTAGGAAAATCATGATTGAGGTCGTAAAGAATCCATTGGCTGAGAGGAAAAGTGGTGCTACTGAATTATTGTGGCATGTGATAAGAGGTTCGTCATCAACATTGCATTCAAGGGCACAAGTGTTGCAGCTTCTATTGGACAAGTCCTTATTCAGCATCGGTGATCAACTCTTGGAAGATCCAGACTGCCTTCTTGAAATTGTCATATCGACTTTCCAGAGATTGAGCAATGAGGCAGGGCCTGTGGAATTAAATTTGATTTGGGATTGCTTATATGGTGAAATAATTGAATCAGTAACCAATGGTCACTCAATGCACGTCAGTCGACTTCTCTCCGTACTCGTATTAATTGTGGAGAGGTTTATGAAGAAAATTTCCGATTACCAGCCTATGTTTAAGCTAGTCAGGTTGCTAGTGCAGACATATGTTCCTCCTGTTACTGAGGAGGGTGGAAAACAAGCTACAGACATCGTCATTAAAATCTTGCAGCTGTCATTGTTCATTGTTGATGCCCACAAAGCTAATGACCTGTCAGCTCTCTCTGATTTTTCATGTCAGTTGGTTCCCATATTTAGTTTGAAGAATCCTGGTTTGCTGACTTTTCTTAAAGACCTTGTGTCAAGGGACTCCAATGTTCTCAAAATATTCAGGATTAATATTATAAGTGCATTGAATGATTTAACCAACATTTCAGAAGAAGAAACTGTATATTTGCTGCTAAGATTGTGTGAGAATCTTAAAATGCCAAGCTTCTCGTTCTTAGATGGTATCTCAAAAGACAAGCTTTCAAGAATTTATGATTTGGTTCAGCAAAGCATCAGTTACTGGATAGGAATGATCAGTAATTCGTTACATGGAGATTTATCTTCTCTTCAGTTGGAACAGAGCAGGCTGGCTCTCCTGTGGGGGACTGTCAAATGCTATCCCTATTTGTTCAATGGCCAGGAGAATCTGACATTACTGTTGGACCTTGTAAATGCTATCGATGAGCTTCTGATGACTGAATCTGGATTGGCAGATCTTACTTGGCAGAGCCTAATTGGTGCTGCTTTGGGTTCTTATAAAGAAATGCTCTCCAGCAGTGGAACTGGATGTGAAGAGTCTGCAATAAGCAAATTCCTGTATCTGGCAAAAAAATACCACTCATCTTCTCAAATATTAGCCCCCATAGCTGATATTTTGGATTCACATTTTGGATCTGTGATTAAAGGGTGCACCAGCTTTAGAAGATATCACCCAGATCTTGCAGCCAGGAATGTAATCGATGCATTAGACATATTGGCTGAAAATCTGTGCAACTGTGATCAAATGCTTCGACGGTCGACCCTCAGAATTTTGTGCCACTATGAACCTTTGAAGTTTGAATCTTCTTTTAACACACAGCCAGATGAGAAAACTGCTGGAAATGATATTATGCAGACCTTTAATGTTGATGTTCGTGGTGATAATGTTCTAGAGCTTCTCCTTTCAGTTGAAACTACTGAGCCTTCATCTACTGATAGAAAAATTGAGCTTCTATTATCCCGGATCCAGGTGAATGTATCTGCCCGGAGGATAGATGAGAATTATGTGCCAGCCCTGTTATATGGCTTGATTGGCATCTTCCACATTCGGCTTAGCAACTTATGGATTCCAGCTAAGGAGTGTCTTGCTGTTCTAATAAGCCAAAACTTTGGAATTGTATGGGAACCGTACATGAAATATCTGGACCACTGTCAGTCATTGTTTCTGATATCTTGTGATCAATCTAGCAGAAGTGGTACCAAATCACTTAATCAGTCAAGTGATTTGGTTGGATACTTCAATTTGTCTATCAATCCCCCATGTGGTAGTACGCCGTGCGCTACACTTTTCTCATTAATGATTCAATCGCTGCAAAAAGTTCCATTTCTAGCTGAAACTCGGTCACGACAATTAATGCCTTTTCTTGAAGTTTCTGGATATAGTGTTGATGATCTTTTGAGTGTTGAGTTATACAATGTACATTGTTGCAAGGGCAGAGAGTGGAAGGAGGCCCTTAAAGAGTTGTTAAACTTGTTTAGGTTGCTGCGGAATCCAAAGTCTTTTTATCAGAGCCAATTCATCAAGGATGTTTTTCTATATAGGCTTCTGGATGAAACAGATACTGAGTTACAGTTAAAGGTTCTTGATTGCCTTTTAAACTGGAAGGATGAATTCTTACTTCCTTACAGTCAGCATCTGAAAGATCTGATCAATGCAAAGAATTTGAGAGAGGAGCTAACGACGTGGAGCTTGTCCAGGGAATCTAATGAAATCGATGAACATCATAGGGATTTCATTGTGCCTATTGTCATTCGGATATTGGTACCAAAAGTCAAGAAACTAAAAACTCTTGCTTCTCGAAAGCATGCAAGTGTACATCAGAGAAGGGCAATACTTGGATTCTTAGCTGAGCTTGACATTCAAGAGCTTCCTCTATTTTTTTTCTTGTTGATAAAGCCTCTTCAAGGTACTTCAGTAACAGCTGATGTGAGCAGACAGTGTCTTTTGAGTTCATCAGAGAGCGTTAAGGATGAATTTGATTCAATTAGCATCTTGAAGCAATTTACTGTGGATGGCTTAAAGGGGCTTTCTTGGAAGAAGAAATTTGGTTTCTTGCATGTCATTGAAGAGATTTTAGCTGTTTTTGATGAATACCATATAAATCCTTTTCTTAATCTACTAATGGGCTGTGTTGTACGGGTACTCGAAAGCTGCACGGCTGCTTTAGAGAGCTCAAAATGCAAAGAACCGTCTCTAACTGATTCTGGCTTCAATGTGGCAGCAGCTTATGATATTGTTGACAGGGAAATAGATATTGTGACTAGCACAGCTGTGAAGCAATTCAAGGAATTGAGATCTTTATGCCTGAAGATTGTTTCTTCTGCTCTTGCTAAGTATGAGAATCATGATTTTCATTCCGAGTTTTGGGACCTTTTCTTTACAGCAGCGAGTCCTTTAATAGGCAGTTTTAAGCAAGAAGGTGCGAGTAGTGAGAAGCCAAGTTCACTATTCTCTTGCTTCCTTGCTATCAGTAGAAGCATCAAGTTTGTGCCACTGTTGGGTAGAAAGAAGAATCTTGTTCCCGATATATTTTCGATGTTTACCATCACGACCGCATCTGATGCGATCATATCTTGTGTTTTTAAGTTCGTTGAAAACTTACTAAATCTTGACAGTCAGCTGGGGACTGAGGATGGTTCTGTCAAAAGAGTGTTGCTTCCTCACCTCAACGTACTTGTAGATAGTCTACACTGTCTGTTCACTATTGATAGTGGAACAAAGAGGCATCCTGCAGATAACGAGCTCTTTGTGTTCAAATTATTGTCGAAGTACATAACGGAGCCTTTAACAGCCAAGAAATTTGTTGATATCTTGCTTCCACTTCTCGCAAAGAGACTCCGAAACTCTGATTCTTGTGTTGTCATTTTACAGATACTTCAATCTGTGGTTGAAGTTGTGGGAAGTGAAAATAATTCTAAAATTTTGAGTTCAGTATCTCCCTTGCTTACATTTGCTGGGCTGGATGTCAGGAAGTCCATTTGTGATGTTCTTAATGCTCTTGCTAAAGATGATTCTTCTGTCTTTGTCGTGGCAAAGCTTCTGAATGAAATGAATGCAACCTCCACAATGGATATTGGGTCCCTTGATTATGACAAAATTGGTGCATATGAAAAGATCAACAGGGAGTTTTTCCACACGGTGGGGAAAGAGCATGCACTGATCATTTTGTCTCAGTCTGCATATGACATGTCATCTGAAGAGTTGATCTTCCGGCAGAGTGCATATAGATTGTTGCTCTGCTTTGTTGAATTTGCCTCTGAAATTGTTGAGTCAAAGGATAAATCTGATCAAGGGTGCTGGACTGAAGCTCTTATTCAACATATTGTAACTAGCTTTCTTTTGAAGCATATGGGAAATGCAATGAATAGGGAAACTTCTGTTCAAAAGCTTTGGATTGATTTACTGCGAGAAATGGTGTTGAAGCTTCCAAAGGTTGCAAACCTCGAATCTTATGGAACTTTGTACAGTCAAGATCCAGAGCAGGATTTCTTCAATAATGTTATTCATTTGCAGAAACACAGGCGAGCCAGGGCACTTTCTCGATTTTCGCAGTTCATTAGTACAGGAAATCATTCTGAGATTGTTAGCACCAAAGTGTTTATCCCACTCTTTTTCAATTTGTTATTTGGTGTACAAGAGGGGAAGGGTGAAAATGTCAGAAGTGCATGTATGGAGGCTATTGCATCAATTGCTGGTTGCATGACCTGGAAACAGTACTATGAACTATTAATGAACTGCTTTCGAGAAATGACTAAACGAGAGAAGCAGAAGGTCATATTGCGATTAATATGCTGTATTCTGGACCACTTTCACTTCTCTGAAACTCCTGCAGAGGGTGTCCTTCGTGCCGAAGCTTTTGAGGGAATATCTTCTAGAGAATTGAGGAGATGCACACAGCCAGCTAAATTTTCTGATATACAGACGTGTATTCAGAAGACAATGCTTCCCAAGATACAAGAATTGCTATCTGATTCTGATAATGTGAATGTGAACATCAGTCTAGTTGCCCTTAAGTTACTCAAATTACTTCCTGGTGAAATTATGAATTTGCAACTTCCAAATATTGTTCATCGCATCTCCAACTTCCTTAAGCATCGCTTGGAGAGTGTTCGAGATGAGGCTAGATTGGCTTTGGCTGCTTGTTTAAAGGAGCTAGGGTTGGAGCACCTACAATTCATGGTCAAAGTCTTGAGGGGCACCCTCAAAAGGGGATCTGAATTGCACACACTTGGTTATATGAATTTTATATTGTCAAAGTTTCTTATCAATCCCATTAGGGGGAAGTTGGATTCTTGTCTTGAAGATCTTTTTTCGGTGATAGAGATTGATATACTTGGAGATGTTTCTGAGCAGAAAGAGGTGGACAAAATTGCTTCAAAAATGAAGGAGACTCGGAAGCAGAAGTCATTTGAAACCCTCAAATTGGTTGCGCAAAACATCACATTTAGAACCCATGCTGTGAAGCTCCTTTCTCTTGTTACAGCTCATCTACAGAAGCAGCTATCTCCAAAACAGAAATCGAAATTGGAGAATATGTTGAATCACATTGCTGATGGAATTCAGTCTAATGCGTCTGTAGATCAAACTGAACTGTTTATATTTGTATATCGCCTCATTAAGGATGGCATAGATGATGTAAATCATGAACGCAAACACGTATATATGTCAGAGGCAGGGAAAGGAGACTGTGATTTGGTGGATAGTCAAATGATTAATTCAGACAGGTTAATAAATCTTGAGCCCAGATATTCTCACTTAATTACTGGTTTTGCACTTGGATTATTGCAAAATCACATTAAGGGCATGAAACTGAACAGAAAAGACGAGGAGCAGCTGTCACTGTTAGACCCTTTGGTTCACTTGTTGGGTGATTGCTTGAGTTCAAAATACGAGAACATTGTGACGACAGCACTCAGATGCCTTTCTCCTCTGGTACGATTACCTCTGCCCTCCCTTGAATCCCAGTCTGACAAGATAAAGAATTCTTTATTGTTTATTGCTCAACGTTCAGCAAATGCTGGCAGTCCTTTGGTGGAGTCTTGTTTGAGGCTGTTGACTGTGCTTCTTCATAACACTGGTGTTACACTTTCAGCAGATCAGTTGCACATGTTAATTCAGTTTCCTTTATTTGTTGACATAGAAAGAAATCCATCTATTGTGTCCCTTTCCCTTCTAAAATCAATAGTGAATAGGAAGCTGGTAGTTCCTGAGATATATGATGTCGTCAAGAGGGTTGCAGAGCTGATGATAACCAGCCAAGTGGAATCAATACGTAAGAAATGTAGTCAAATTTTACTCCAATTTTTGCTTGACTATCATCTGTCAGAGAAACGCTTGCAGCAGCATCTTGATTTCTTTCTTGCGAATCTCAGATATGAACATTCTTCTGGAAGAGAAGCTGTACTTGAAATGCTGCATGCCATTATAATGAAGTTTCCAGCAAGTATTCTTGATGAGCAGTCACAGACGATATTTGTGCGTCTGGTGGTTTGTTTGGCTAATGACCATGACAACAAAGTCCGTTCCATGACTGGTGCTTCTATAAAGCTGCATGGGCGTGTCAGTTCTCGCTCACTTAAATCCATTCTTGAGTATAGTCCCTGGTATGTGGGCGAAAAACAGCATCTATGGAGTGCTGCAGCACAGGTAAAGTTGTGGACTCTGTTCTATAGGTGA
Protein:  
MATPADARAVKSLNTGEGSKKFVYKSNVQQIAEIDINVYRSLDPVKSEPFEGSTFFRDCLVEWRELNTAEDFISFYQEMFPLVQTLPQIILQKELIVSKLLSRLQIKSRLSLEPILRLVATLSRDLLEDFLPFLQRIVNAIVFLLKNGGDKDPDIIKQIFTSWSYIMMFLQKYLIKDVIHVLKVTVKLRYYPHGSIQKFVAESVSFLLRNAPVEQLIKGVRKIMIEVVKNPLAERKSGATELLWHVIRGSSSTLHSRAXQVLQLLLDKSLFSIGDQLLEDPDCLLEIVISTFQRLSNEAGPVELNLIWDCLYGEIIESVTNGHSMHVSRLLSVLVLIVENXFMKKISDYQPMFKLVRLLVQTYVPPVTEEGGKQATDIVIKILQLSLFIVDGXHKANDLSALSDFSCQLVPIFSLKNPGLLTFLKDLVSRDSNVLKIFRINIISALNDLTNISEEETVYLLLRLCENLKMPSFSFLDGISKDKLSRIYDLVQQSISYWIGMISNSLHGDLSSLQLEQSRLALLWGTVKCYPYLFNGQENLTLLLDLVNAIDELLMTESGLADLTWQSLIGAALGSYKEMLSSSGTGCEESAISKFLYLAKKYHSSSQILAPIADILDSHFGSVIKGCTSFRRYHPDLAARNVIDALDILAENLCNCDQMLRRSTLRILCHYEPLKFESSFNTQPDEKTAGNDIMQTFNVDVRGDNVLELLLSVETTEPSSTDRKIELLLSRIQVNVSARRIDENYVPALLYGLIGIFHIRLSNLWIPAKECLAVLISQNFGIVWEPYMKYLDHCQSLFLISCDQSSRSGTKSLNQSSDLVGYFNLSINPPCGSTPCATLFSLMIQSLQKVPFLAETRSRQLMPXFLEVSGYSVDDLLSVELYNVHCCKGREWKEALKELLNLFRLLRNPKSFYQSQFIKDVFLYRLLDETDTELQLKVLDCLLNWKDEFLLPYSQHLKDLINAKNLREELTTWSLSRESNEIDEHHRDFIVPIVIRILVPKVKKLKTLASRKHASVHQRRAILGFLAELDIQELPLFFFLLIKPLQGTSVTADVSRQCLLSSSESVKDEFDSISILKQFTVDGLKGLSWKKKFGFLHVIEEILAVFDEYHINPFLNLLMGCVVRVLESCTAALESSKCKEPSLTDSGFNVAAAYDIVDREIDIVTSTAVKQFKELRSLCLKIVSSALAKYENHDFHSEFWDLFFTAASPLIGSFKQEGASSEKPSSLFSCFLAISRSIKFVPLLGRKKNLVPDIFSMFTITTASDAIISCVFKFVENLLNLDSQLGTEDGSVKRVLLPHLNVLVDSLHCLFTIDSGTKRHPADNELFVFKLLSKYITEPLTAKKFVDILLPLLAKRLRNSDSCVVILQILQSVVEVVGSENNSKILSSVSPLLTFAGLDVRKSICDVLNALAKDDSSVFVVAKLLNEMNATSTMDIGSLDYDTXIGAYEKINREFFHTVGKEHALIILSQSAYDMSSEELIFRQSAYRLLLCFVEFASEIVESKDKSDQGCWTEALIQHIVTSFLLKHMGNAMNRETSVQKLWIDLLREMVLKLPKVANLESYGTLYSQDPEQDFFNNVIHLQKHRRARALSRFSQFISTGNHSEIVSTKVFIPLFFNLLFGVQEGKGENVRSACMEAIASIAGCMTWKQYYELLMNCFREMTKREKQKVILRLICCILDHFHFSETPAEGVLRAEAFEGISSRELRRCTQPAKFSDIQTCIQKTMLPKIQELLSDSDNVNVNISLVALKLLKLLPGEIMNLQLPNIVHRISNFLKHRLESVRDEARLALAACLKELGLEHLQFMVKVLRGTLKRGSELHTLGYTXNFILSKFLINPIRGKLDSCLEDLFSVIEIDILGDVSEQKEVDKIASKMKETRKQKSFETLKLVAQNITFRTHAVKLLSLVTAHLQKQLSPKQKSKLENMLNHIADGIQSNASVDQTELFIFVYRLIKDGIDDVNHERKHVYMSEAGKGDCDLVDSQMINSDRLINLEPRYSHLITGFALGLLQNHIKGMKLNRKDEEQLSLLDPLVHLLGDCLSSKYENIVTTALRCLSPLVRLPLPSLESQSDKIKNSLLFIAQRSANAGSPLVESCLRLLTVLLHNTGVTLSADQLHMLIQFPLFVDIERNPSIVSLSLLKSIVNRKLVVPEIYDVVKRVAELMITSQVESIRKKCSQILLQFLLDYHLSEKRLQQHLDFFLANLRYEHSSGREAVLEMLHAIIMKFPASILDEQSQTIFVRLVVCLANDHDNKVRSMTGASIKLLXGRVSSRSLKSILEYSXPWYVGEKQHLWSAAAQVKLWTLFYR